estim_pars

Runs the AmP estimation procedure

Contents

Syntax

[nsteps, info, fval] = estim_pars

Description

Runs the entire estimation procedure, see Marques et al 2018, PLOS computational biology https://doi.org/10.1371/journal.pcbi.1006100 See also Robles et al 2021, (in prep) for the ea-method.

Input

Output

Remarks

estim_options sets many options; Option filter = 0 selects filter_nat, which always gives a pass, but still allows for costomized filters in the predict file; Option output >= 5 allow the filling of global refPets to choose comparison species, otherwise this is done automatically.